Early identification of glufosinate-resistant soybeans using plant image analysis

Abstract

The use of glufosinate-resistant GM soybean has expanded, raising concerns about resistant weed development and unintended transgene flow. To support monitoring for timely management, we propose an early, non-destructive identification method using spectral images acquired from whole soybean plants after glufosinate treatment. We evaluated the potential of spectral imaging, using RGB, infrared (IR) thermal, and chlorophyll fluorescence (CF) sensors, for early detection of glufosinate resistance in soybean. In the dose-response test, the key spectral indices including NDI, temperature difference, F v /F m , and NPQ distinguished between resistant and susceptible soybeans within 4 to 24 hours after treatment (HAT). IR thermal and CF imaging showed higher sensitivity in identifying resistance than RGB imaging by detecting spectral responses associated with physiological changes before visual symptoms appeared. Validation test with a single dose treatment of glufosinate reconfirmed that image analysis by both the naked eye and machine learning (ML) can discriminate between resistant and susceptible soybeans in a single day after glufosinate treatment. ML-based classification using IR thermal index achieved 100% accuracy as early as 6 HAT and the classification by the naked eye using IR thermal images showed 96.6% accuracy at 24 HAT. These results suggest that plant imaging enables early and non-destructive identification of herbicide-resistant individuals by detecting early spectral changes to herbicide treatment. These findings support its use as a potential alternative to conventional diagnostic methods for detecting individuals containing transgenes in herbicide-resistant GM soybean cultivation for future applications in herbicide-resistant weed monitoring.

Code and data availability

The paper describes spectral (RGB, IR thermal, chlorophyll fluorescence) image-based phenotyping of glufosinate-resistant vs. susceptible soybeans with ML classification, but no public repository deposit of images, phenotype data, or analysis code is stated. The data availability statement only points to the article/Sl

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