Limitations of Solar-Induced Chlorophyll Fluorescence (SIF) for Estimating Photosynthesis Under Stress

Abstract

High-throughput measurements of photosynthesis of plants grown under various conditions may provide important insights into the plasticity of the photosynthetic performance of plants. Remote sensing of photosynthetic activity is the next generation of fast scanning techniques, enabling high-throughput photosynthesis measurements under controlled conditions. We hypothesized that by measuring SIF simultaneously with whole-plant water relations in a standardized controlled drought experiment, we would be able to quantify photosynthetic activity and to detect water stress at an early stage. A functional-phenotyping platform was used to apply the controlled drought treatment and to monitor the growth and water balance of tomato introgression lines (ILs). A new SIF-derived index, electron transport rate (RS-ETRi), was found to be negatively correlated with whole-plant stomatal conductance (Gsc) under non-stressed conditions. No significant relationships were found between SIF and plant biomass or Gsc. SIF 687 responded to drought earlier than any of the other measured vegetation indices. SIF based indices could not differentiate between introgressed lines of tomato; whereas differences between Introgression Lines were clearly identified by the water-relations measurements. We concluded that SIF did not provide any advantage over commonly used methods for detecting physiological differences between the Introgression Lines. Overall, although SIF plays a significant role in photosynthesis, the relationship between SIF and photosynthesis is complex and we believe it would be an oversimplification to use SIF to quantify photosynthetic activity on close canopy spatial resolution level.

Code and data availability

The supplied blocks describe a SIF-based functional phenotyping study of tomato introgression lines, but contain no public phenotype/trait dataset, spectral data, images, analysis code, or trained model with an authors' deposit URL. Supplementary materials are referenced but no public availability or link is given. The

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