Hyperspectral Imaging-Based Evaluation of Seasonal Growth Characteristics in Turfgrass.

Abstract

Efficient phenotyping is essential for accelerating genetic improvement in turfgrass breeding, where manual measurements are labor-intensive. This study evaluated hyperspectral imaging (HSI) as a high-throughput tool for assessing Zoysia spp. breeding populations consisting of 464 genotypes. HSI data (400-1000 nm) were processed through a user-in-the-loop hybrid segmentation pipeline integrating UMAP dimensionality reduction, DBSCAN clustering, Random Forest classification, and pseudo-RGB refinement. To independently assess vegetation classification performance, 10,000 manually annotated reference points from 50 pseudo-RGB images were compared with the automated module, yielding an overall accuracy of 0.9697, a precision of 0.8830, a recall of 0.9240, a specificity of 0.9779, an F1-score of 0.9030, and Cohen's kappa of 0.8851. A Combined Ranking Score (CRS) integrating five vegetation indices and vegetation pixel count was significantly associated with aerial shoot count ( r = -0.445, p r = -0.207, p < 0.001). The highest-ranked genotype showed a 9370.3-pixel increase in vegetation area between 6 and 16 weeks after transplanting, compared with 1417.7 pixels for the lowest-ranked genotype. Classification performance declined under high-coverage conditions, indicating increased mixed-pixel ambiguity in dense canopies. These results suggest that HSI-based CRS can support rapid, objective, and non-destructive relative ranking of density-related vegetative growth in turfgrass breeding. Because the study was conducted at a single location and season and correlations with manual traits were moderate, the framework is best interpreted as a screening and ranking tool rather than a direct predictive model.

Code and data availability

The paper's hyperspectral imaging data, segmentation pipeline outputs, and phenotype measurements are not publicly deposited; the Data Availability Statement states they are available only upon request from the corresponding author. No author code repository or public dataset URL is provided. The only external URLs (NT

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