Paper record

RankspeQ: An R Package Platform for Genotype Characterization and Performance-Ranking Based on MultispeQ Measurements

Jonatan Soto · Johan Steven Aparicio · Aquiles Enrique Darghan · Milan O. Urban

SSRN Electronic Journal · 1 Jan 2023 · 10.2139/ssrn.4330217

Abstract

Abstract has not been obtained from indexed metadata or an accessible article page.

Code and data availability

The paper's authors' analysis code (RankspeQ R package) is publicly available on GitHub, and the MultispeQ phenotype dataset used in the case study ('19-06 BASE100') is publicly hosted on PhotosynQ. Phenotype data is not on request; only other data availability is stated as on request.

Codepublic

ll include new algorithms (e.g. trait heritability), generalization to other species and a shiny interface to make the software user friendly. Required metadata Current code version Nr Code metadata description Please fill in this column C1 Current code version V1.0 C2 Permanent link to code/repository used of this code version https://github.com/jssotob/RankspeQ C3 Code Ocean compute capsule Not applicable C4 Legal Code License MIT + file LICENSE C5 Code versioning system used Git C6 Software code languages, tools, and services used R C7 Compilation requirements, operating environments & dependencies R ≥ 4.0 RStudio≥1.2.5 C8 If available Link to developer documentation/manual Not appli

Open resource ↗jssotob/RankspeQ · pdf-raw-page:1 lines:1-81